Bioinformatics Computing-II (BIF604)
Total Marks 15
Note: There are two questions. First one is theoretical and second one is practical. You are supposed to do your assignment by yourself. Any kind of plagiarism will be marked straight zero.
Question 1: What you have learnt in basics of Bioinformatics. Also enlist and discuss the tools software and methods you have studied till now. (5)
Question 2: Select a raw data set of Arabidopsis thaliana from GEO. Put it into GALAXY and de-contaminate it. After filtering you are supposed to align it on the any of the prescribed reference and show the results (At least header). (10)
The result of every step must be shown in the assignment
In case of any query please email at [email protected] or contact me on Skype mjhasnain_1 before the deadline (10-11-2019). Please note that you are given with almost 4 weeks. So, no extra time will be granted. You are supposed to do your assignment before the deadline to avoid several issues like unavailability of internet, electricity and signals etc.
BIF604 GDB 1 Solution and Discussion
Why we prefer Next Generation Sequencing over First Generation Sequencing?
Answer should not exceed 3 lines.